All tools are accessible as Apps in the CyVerse Discovery Environment (formerly iPlant). The CyVerse Cyberinfrastructure is a freely available resource for computation, storage, and data analysis for the life sciences. We plan to extend the list of tools for viruses pending funding. The are also general Apps for metagenomics and microbial ecology available through the iMicrobe Project.
Viral Analysis Tools
|PCPipe||Protein clustering pipeline and annotation|
|VirSorter||Find viral contigs in a microbial metagenome|
|vContact||Guilt-by-contig-association automatic classification of viral contigs|
|vContact-PCs||Generate PC-profiles using vContact/MCL|
All tools are fully functional and live on the iPlant system.